Wait, I think I know what you mean. I’m assuming, you’re saying that, in case of a manual deploy, when you upload a new deploy with a single file, the new deploy has only 1 file instead of all files from the previous deploy.
If yes, that is expected. I’d advise you to go through this thread: Skipping CDN file diff - #3 by hrishikesh
If you mean something else, your explanation is unclear. Please try rephrasing.